Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad/nad(p)-binding oxidoreductase | EXZ48_03505 | Not Available | - | 738524 - 739933 | 49796.9 |
| deor/glpr transcriptional regulator | EXZ48_03510 | Not Available | + | 740189 - 740959 | 27421.9 |
| allantoin permease | EXZ48_03515 | Not Available | - | 741002 - 742357 | 48507.8 |
| hydantoinase/oxoprolinase family protein | EXZ48_03520 | Not Available | - | 742838 - 744916 | 74519.1 |
| hydantoinase b/oxoprolinase family protein | EXZ48_03525 | Not Available | - | 744929 - 746689 | 63279.6 |
| helix-turn-helix domain-containing protein | EXZ48_03530 | Not Available | + | 746932 - 747894 | 36263.8 |
| cytosine deaminase | EXZ48_03535 | Not Available | - | 747889 - 749091 | 43296.2 |
| hydrolase | EXZ48_03540 | Not Available | - | 749112 - 750479 | 49072.1 |
| abc transporter substrate-binding protein | EXZ48_03545 | Not Available | + | 750635 - 752209 | 58249.6 |
| abc transporter permease | EXZ48_03550 | Not Available | + | 752429 - 753394 | 35235.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.