Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | EXZ48_03305 | Not Available | + | 696859 - 698214 | 49520.8 |
| tripartite tricarboxylate transporter substrate binding protein bugd | EXZ48_03310 | Not Available | + | 698414 - 699397 | 33960.9 |
| tripartite tricarboxylate transporter tctb family protein | EXZ48_03315 | Not Available | + | 699544 - 700005 | 16469.0 |
| tripartite tricarboxylate transporter permease | EXZ48_03320 | Not Available | + | 700015 - 701520 | 52368.4 |
| arac family transcriptional regulator | EXZ48_03325 | Not Available | + | 701653 - 702537 | 33292.0 |
| tonb-dependent siderophore receptor | EXZ48_03330 | Not Available | + | 702698 - 704881 | 78917.9 |
| llm class flavin-dependent oxidoreductase | EXZ48_03335 | Not Available | - | 705057 - 706079 | 37466.2 |
| hypothetical protein | EXZ48_03340 | Not Available | - | 706381 - 706731 | 13361.1 |
| dj-1/pfpi family protein | EXZ48_03345 | Not Available | - | 706754 - 707350 | 21156.2 |
| duf861 domain-containing protein | EXZ48_03350 | Not Available | - | 707447 - 707806 | 13267.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.