Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homogentisate 1,2-dioxygenase | EXZ48_03255 | Not Available | - | 687135 - 688466 | 49888.3 |
| marr family transcriptional regulator | EXZ48_03260 | Not Available | + | 688548 - 689006 | 17409.2 |
| wgr domain-containing protein | EXZ48_03265 | Not Available | + | 689094 - 689348 | 9709.93 |
| plasmid partitioning protein repa | EXZ48_03270 | Not Available | + | 689588 - 690799 | 45108.1 |
| plasmid partitioning protein repb | EXZ48_03275 | Not Available | + | 690802 - 691833 | 37630.6 |
| replication initiation protein repc | EXZ48_03280 | Not Available | + | 691991 - 693313 | 47826.6 |
| hypothetical protein | EXZ48_03285 | Not Available | + | 693407 - 693700 | 10933.0 |
| hypothetical protein | EXZ48_03290 | Not Available | - | 693703 - 694284 | 19717.9 |
| heme-degrading domain-containing protein | EXZ48_03295 | Not Available | + | 694433 - 694933 | 18346.9 |
| sensor histidine kinase | EXZ48_03300 | Not Available | + | 695132 - 696862 | 63144.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.