Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metq/nlpa family lipoprotein | EXZ48_03205 | Not Available | - | 679071 - 679919 | 30594.3 |
| hypothetical protein | EXZ48_03210 | Not Available | + | 679906 - 680088 | 7123.52 |
| merr family transcriptional regulator | EXZ48_03215 | Not Available | - | 680142 - 680957 | 30023.9 |
| 4-aminobutyrate--2-oxoglutarate transaminase | EXZ48_03220 | Not Available | + | 681207 - 682484 | 45596.2 |
| nad-dependent succinate-semialdehyde dehydrogenase | EXZ48_03225 | Not Available | + | 682581 - 684062 | 52071.4 |
| type ii toxin-antitoxin system vapc family toxin | EXZ48_03230 | Not Available | - | 684099 - 684494 | 14195.9 |
| transcription factor | EXZ48_03235 | Not Available | - | 684494 - 684733 | 9060.89 |
| maleylacetoacetate isomerase | EXZ48_03240 | Not Available | - | 684791 - 685435 | 23647.4 |
| faa hydrolase family protein | EXZ48_03245 | Not Available | - | 685440 - 686456 | 36148.0 |
| duf2585 domain-containing protein | EXZ48_03250 | Not Available | + | 686455 - 687132 | 24630.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.