Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase | EXZ48_03155 | Not Available | + | 667476 - 669566 | 75411.0 |
| dihydrolipoamide succinyltransferase | EXZ48_03160 | Not Available | + | 669570 - 670769 | 42778.2 |
| dihydrolipoyl dehydrogenase | EXZ48_03165 | Not Available | + | 670766 - 672169 | 47373.2 |
| hypothetical protein | EXZ48_03170 | Not Available | + | 672381 - 673463 | 37512.5 |
| rrf2 family transcriptional regulator | EXZ48_03175 | Not Available | - | 673497 - 673961 | 16555.2 |
| taurine abc transporter substrate-binding protein | EXZ48_03180 | Not Available | + | 674462 - 675466 | 35367.0 |
| abc transporter atp-binding protein | EXZ48_03185 | Not Available | + | 675560 - 676366 | 28412.5 |
| abc transporter permease subunit | EXZ48_03190 | Not Available | + | 676363 - 677205 | 29269.8 |
| abc transporter permease | EXZ48_03195 | Not Available | - | 677280 - 677936 | 22967.9 |
| methionine abc transporter atp-binding protein | EXZ48_03200 | Not Available | - | 677917 - 678987 | 37891.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.