Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_03100 | Not Available | + | 657105 - 657968 | 32057.1 |
| abc transporter permease | EXZ48_03105 | Not Available | + | 657965 - 658759 | 28486.0 |
| abc transporter atp-binding protein | EXZ48_03110 | Not Available | + | 658756 - 659841 | 38311.4 |
| mbl fold metallo-hydrolase | EXZ48_03115 | Not Available | + | 659848 - 660576 | 27453.3 |
| aldehyde dehydrogenase family protein | EXZ48_03120 | Not Available | + | 660589 - 662022 | 51399.4 |
| dmt family transporter | EXZ48_03125 | Not Available | + | 662222 - 663208 | 34061.8 |
| hypothetical protein | EXZ48_03130 | Not Available | - | 663212 - 663445 | 8109.24 |
| dmt family transporter | EXZ48_03140 | Not Available | + | 665490 - 666389 | 32481.7 |
| cytochrome c oxidase subunit ii | EXZ48_03145 | Not Available | - | 666398 - 666910 | 18016.7 |
| lrp/asnc family transcriptional regulator | EXZ48_03150 | Not Available | - | 666886 - 667353 | 17473.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.