Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EXZ48_03045 | Not Available | - | 648431 - 649510 | 39110.5 |
| agmatinase | EXZ48_03050 | Not Available | - | 649588 - 650640 | 37453.8 |
| lysr family transcriptional regulator | EXZ48_03055 | Not Available | + | 650823 - 651839 | 36965.3 |
| aminotransferase | EXZ48_03060 | Not Available | + | 651857 - 653053 | 42386.8 |
| marr family transcriptional regulator | EXZ48_03065 | Not Available | + | 653248 - 653715 | 16769.2 |
| copper chaperone | EXZ48_03070 | Not Available | + | 653792 - 654007 | 7271.61 |
| cu(i)-responsive transcriptional regulator | EXZ48_03075 | Not Available | + | 654223 - 654633 | 15111.2 |
| duf4440 domain-containing protein | EXZ48_03080 | Not Available | - | 654635 - 655027 | 14756.0 |
| tetr/acrr family transcriptional regulator | EXZ48_03085 | Not Available | - | 655048 - 655674 | 23484.5 |
| spermidine/putrescine abc transporter substrate-binding protein | EXZ48_03090 | Not Available | + | 655803 - 656879 | 39370.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.