Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_02945 | Not Available | + | 627842 - 628858 | 36020.9 |
| abc transporter permease | EXZ48_02950 | Not Available | + | 628858 - 629829 | 35840.8 |
| abc transporter atp-binding protein | EXZ48_02955 | Not Available | + | 629826 - 630785 | 34654.4 |
| dipeptide abc transporter atp-binding protein | EXZ48_02960 | Not Available | + | 630794 - 631780 | 36071.6 |
| nudix hydrolase | EXZ48_02965 | Not Available | + | 632268 - 632804 | 19852.6 |
| hypothetical protein | EXZ48_02970 | Not Available | + | 633019 - 633228 | 7641.29 |
| fmn-binding glutamate synthase family protein | EXZ48_02975 | Not Available | + | 633386 - 635044 | 59815.9 |
| gfa family protein | EXZ48_02980 | Not Available | - | 635105 - 635590 | 17629.8 |
| gntr family transcriptional regulator | EXZ48_02985 | Not Available | - | 635910 - 636596 | 25413.6 |
| abc transporter atp-binding protein | EXZ48_02990 | Not Available | + | 636854 - 637954 | 39792.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.