Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_02840 | Not Available | + | 606181 - 607425 | 45800.1 |
| electron transfer flavoprotein subunit beta/fixa family protein | EXZ48_02845 | Not Available | + | 607490 - 608242 | 26454.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | EXZ48_02850 | Not Available | + | 608239 - 609189 | 32027.4 |
| arac family transcriptional regulator | EXZ48_02855 | Not Available | + | 609238 - 610224 | 37402.5 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | EXZ48_02860 | Not Available | + | 610221 - 610697 | 16712.3 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | EXZ48_02865 | Not Available | + | 610697 - 612793 | 74173.3 |
| transporter substrate-binding domain-containing protein | EXZ48_02870 | Not Available | + | 613126 - 613911 | 27970.6 |
| amino acid abc transporter permease | EXZ48_02875 | Not Available | + | 613986 - 614636 | 22951.8 |
| amino acid abc transporter permease | EXZ48_02880 | Not Available | + | 614639 - 615298 | 24242.3 |
| amino acid abc transporter atp-binding protein | EXZ48_02885 | Not Available | + | 615295 - 616059 | 28115.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.