Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | EXZ48_02790 | Not Available | + | 597576 - 598454 | 30887.1 |
| branched-chain amino acid abc transporter permease | EXZ48_02795 | Not Available | + | 598451 - 599497 | 37235.4 |
| glutathione s-transferase family protein | EXZ48_02800 | Not Available | + | 599561 - 600346 | 28988.3 |
| catechol 1,2-dioxygenase | EXZ48_02805 | Not Available | + | 600365 - 601291 | 33538.1 |
| sdr family oxidoreductase | EXZ48_02810 | Not Available | + | 601295 - 602056 | 25964.3 |
| 3-keto-5-aminohexanoate cleavage protein | EXZ48_02815 | Not Available | + | 602056 - 602934 | 31189.9 |
| zinc-binding alcohol dehydrogenase family protein | EXZ48_02820 | Not Available | + | 602966 - 603970 | 35576.0 |
| cupin domain-containing protein | EXZ48_02825 | Not Available | + | 603979 - 604311 | 11753.2 |
| gamma carbonic anhydrase family protein | EXZ48_02830 | Not Available | + | 604336 - 604878 | 18759.4 |
| alpha/beta hydrolase | EXZ48_02835 | Not Available | + | 604916 - 605968 | 37361.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.