Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1839 family protein | EXZ48_02740 | Not Available | - | 587618 - 588586 | 36213.7 |
| amino acid--[acyl-carrier-protein] ligase | EXZ48_02745 | Not Available | - | 588589 - 589503 | 33842.5 |
| acyl-coa dehydrogenase | EXZ48_02750 | Not Available | - | 589508 - 590680 | 41367.8 |
| acyl carrier protein | EXZ48_02755 | Not Available | - | 590677 - 590931 | 8953.66 |
| lysr family transcriptional regulator | EXZ48_02760 | Not Available | - | 591474 - 592373 | 33321.2 |
| sdr family oxidoreductase | EXZ48_02765 | Not Available | + | 592514 - 593287 | 26852.1 |
| laci family transcriptional regulator | EXZ48_02770 | Not Available | - | 593372 - 594409 | 37803.7 |
| branched-chain amino acid abc transporter substrate-binding protein | EXZ48_02775 | Not Available | + | 594726 - 596003 | 45794.2 |
| abc transporter atp-binding protein | EXZ48_02780 | Not Available | + | 596089 - 596835 | 26903.0 |
| abc transporter atp-binding protein | EXZ48_02785 | Not Available | + | 596835 - 597563 | 26389.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.