Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_02685 | Not Available | + | 574045 - 575547 | 55113.7 |
| duf861 domain-containing protein | EXZ48_02690 | Not Available | - | 575680 - 576192 | 18787.6 |
| hypothetical protein | EXZ48_02695 | Not Available | + | 576349 - 577329 | 36483.6 |
| acyl carrier protein | EXZ48_02700 | Not Available | + | 577362 - 577619 | 9217.95 |
| amp-dependent synthetase | EXZ48_02705 | Not Available | + | 577616 - 579139 | 55155.6 |
| type iii plp-dependent enzyme | EXZ48_02710 | Not Available | + | 579132 - 580412 | 44526.9 |
| murr/rpir family transcriptional regulator | EXZ48_02715 | Not Available | - | 580513 - 581355 | 30686.4 |
| mfs transporter | EXZ48_02720 | Not Available | + | 581531 - 582973 | 51386.5 |
| aspartate/glutamate racemase family protein | EXZ48_02725 | Not Available | + | 582981 - 583664 | 23211.1 |
| nicotinate phosphoribosyltransferase | EXZ48_02730 | Not Available | - | 583661 - 584965 | 49454.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.