Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | EXZ48_02510 | Not Available | + | 539769 - 540143 | 14520.3 |
| duf423 domain-containing protein | EXZ48_02515 | Not Available | - | 540146 - 540511 | 12187.2 |
| globin | EXZ48_02520 | Not Available | - | 540516 - 540932 | 15559.5 |
| tetr/acrr family transcriptional regulator | EXZ48_02525 | Not Available | + | 541071 - 541631 | 20784.1 |
| qace family quaternary ammonium compound efflux smr transporter | EXZ48_02530 | Not Available | + | 541674 - 542015 | 12177.5 |
| trehalose utilization protein thua | EXZ48_02535 | Not Available | + | 542124 - 542909 | 29373.8 |
| gfo/idh/moca family oxidoreductase | EXZ48_02540 | Not Available | + | 542917 - 543960 | 37825.7 |
| laci family transcriptional regulator | EXZ48_02545 | Not Available | - | 543963 - 544979 | 36092.3 |
| hypothetical protein | EXZ48_02550 | Not Available | + | 545419 - 546435 | 37202.1 |
| hypothetical protein | EXZ48_02560 | Not Available | - | 548360 - 549115 | 27467.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.