Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase | EXZ48_33680 | Not Available | + | 6940837 - 6941169 | 11723.5 |
| is110 family transposase | EXZ48_33690 | Not Available | - | 6942600 - 6943634 | 37976.0 |
| xanthine dehydrogenase family protein subunit m | EXZ48_33700 | Not Available | + | 6944359 - 6945222 | 30694.2 |
| mfs transporter | EXZ48_33705 | Not Available | + | 6945321 - 6946541 | 43637.5 |
| tetr/acrr family transcriptional regulator | EXZ48_33710 | Not Available | - | 6946610 - 6947215 | 23378.9 |
| (2fe-2s)-binding protein | EXZ48_33715 | Not Available | + | 6947395 - 6947877 | 17217.8 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | EXZ48_33720 | Not Available | + | 6947874 - 6950225 | 84159.6 |
| carbon monoxide dehydrogenase | EXZ48_33725 | Not Available | + | 6950247 - 6950705 | 15942.9 |
| dna polymerase iv | EXZ48_33740 | Not Available | + | 6952945 - 6954039 | 39819.9 |
| hypothetical protein | EXZ48_33745 | Not Available | - | 6954197 - 6954766 | 20204.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.