Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | EXZ48_33575 | Not Available | - | 6918458 - 6919027 | 21194.9 |
| hypothetical protein | EXZ48_33580 | Not Available | - | 6919220 - 6920374 | 43532.9 |
| is66 family insertion sequence hypothetical protein | EXZ48_33585 | Not Available | + | 6920566 - 6920979 | 15446.6 |
| is66 family insertion sequence hypothetical protein | EXZ48_33590 | Not Available | + | 6920976 - 6921320 | 12737.5 |
| is66 family transposase | EXZ48_33595 | Not Available | + | 6921368 - 6922999 | 60445.6 |
| plasmid pria4b orf-3 family protein | EXZ48_33600 | Not Available | + | 6923002 - 6923586 | 22175.4 |
| cation transporter | EXZ48_33605 | Not Available | - | 6923569 - 6923874 | 10315.2 |
| cytochrome o ubiquinol oxidase subunit iv | EXZ48_33610 | Not Available | - | 6923931 - 6924338 | 14848.5 |
| cytochrome o ubiquinol oxidase subunit iii | EXZ48_33615 | Not Available | - | 6924335 - 6924955 | 22975.2 |
| cytochrome o ubiquinol oxidase subunit i | EXZ48_33620 | Not Available | - | 6924960 - 6926966 | 74868.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.