Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | EXZ48_33120 | Not Available | + | 6831408 - 6832523 | 39339.7 |
| abc transporter permease | EXZ48_33125 | Not Available | + | 6832520 - 6833323 | 28765.2 |
| abc transporter atp-binding protein | EXZ48_33130 | Not Available | + | 6833320 - 6834117 | 29332.3 |
| aliphatic sulfonate abc transporter substrate-binding protein | EXZ48_33135 | Not Available | + | 6834134 - 6835120 | 34704.7 |
| duf4976 domain-containing protein | EXZ48_33140 | Not Available | + | 6835174 - 6836727 | 58585.9 |
| formylglycine-generating enzyme family protein | EXZ48_33145 | Not Available | + | 6836809 - 6837675 | 31587.8 |
| rida family protein | EXZ48_33150 | Not Available | + | 6838006 - 6838398 | 14433.4 |
| dctp family trap transporter solute-binding subunit | EXZ48_33155 | Not Available | + | 6838524 - 6839522 | 35977.4 |
| trap transporter small permease | EXZ48_33160 | Not Available | + | 6839609 - 6840082 | 17304.5 |
| integrase | EXZ48_33175 | Not Available | - | 6841745 - 6842608 | 31879.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.