Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EXZ48_02310 | Not Available | - | 503728 - 504720 | 35719.5 |
| abc transporter permease | EXZ48_02315 | Not Available | - | 504744 - 505613 | 31744.6 |
| abc transporter permease | EXZ48_02320 | Not Available | - | 505610 - 506494 | 31697.0 |
| hypothetical protein | EXZ48_02325 | Not Available | - | 506498 - 506833 | 11830.2 |
| abc transporter atp-binding protein | EXZ48_02330 | Not Available | - | 506833 - 507636 | 29467.5 |
| cupin domain-containing protein | EXZ48_02335 | Not Available | + | 507756 - 508169 | 14812.7 |
| hypothetical protein | EXZ48_02340 | Not Available | - | 508262 - 508636 | 13146.3 |
| dihydropyrimidinase | EXZ48_02345 | Not Available | - | 508633 - 510087 | 52934.9 |
| duf559 domain-containing protein | EXZ48_02350 | Not Available | - | 510090 - 510716 | 23498.5 |
| zn-dependent hydrolase | EXZ48_02355 | Not Available | - | 510721 - 511971 | 44436.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.