Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase | EXZ48_32720 | Not Available | - | 6752724 - 6753320 | 22132.6 |
| hypothetical protein | EXZ48_32725 | Not Available | + | 6753910 - 6754128 | 7751.99 |
| hypothetical protein | EXZ48_32730 | Not Available | - | 6754136 - 6756781 | 94508.6 |
| plasmid mobilization relaxosome protein mobc | EXZ48_32735 | Not Available | - | 6756696 - 6757064 | 13763.7 |
| para family protein | EXZ48_32740 | Not Available | + | 6757542 - 6758225 | 24853.0 |
| hypothetical protein | EXZ48_32745 | Not Available | + | 6758222 - 6758599 | 13845.5 |
| replication initiation protein repc | EXZ48_32750 | Not Available | - | 6758620 - 6759834 | 44620.5 |
| plasmid partitioning protein repb | EXZ48_32755 | Not Available | - | 6759998 - 6761023 | 37826.3 |
| plasmid partitioning protein repa | EXZ48_32760 | Not Available | - | 6761005 - 6762222 | 44748.3 |
| hypothetical protein | EXZ48_32765 | Not Available | - | 6762856 - 6763326 | 18343.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.