Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_32225 | Not Available | + | 6661894 - 6663540 | 60571.0 |
| trans-aconitate 2-methyltransferase | EXZ48_32230 | Not Available | - | 6663541 - 6664314 | 28237.1 |
| haloacid dehalogenase type ii | EXZ48_32235 | Not Available | - | 6664326 - 6664976 | 24259.8 |
| alcohol dehydrogenase | EXZ48_32240 | Not Available | - | 6665065 - 6666105 | 37067.6 |
| gnat family n-acetyltransferase | EXZ48_32245 | Not Available | - | 6666122 - 6666637 | 18862.1 |
| branched-chain amino acid aminotransferase | EXZ48_32250 | Not Available | + | 6666808 - 6667689 | 31905.8 |
| branched-chain amino acid abc transporter substrate-binding protein | EXZ48_32255 | Not Available | - | 6667760 - 6668866 | 37594.6 |
| hypothetical protein | EXZ48_32260 | Not Available | + | 6669167 - 6669739 | 21523.6 |
| grpb family protein | EXZ48_32265 | Not Available | + | 6669865 - 6670374 | 18456.9 |
| duf1428 family protein | EXZ48_32270 | Not Available | + | 6670482 - 6670835 | 13205.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.