Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tail fiber domain-containing protein | EXZ48_32175 | Not Available | + | 6650135 - 6651649 | 54685.3 |
| hypothetical protein | EXZ48_32180 | Not Available | + | 6651646 - 6651924 | 9742.87 |
| hypothetical protein | EXZ48_32185 | Not Available | + | 6651934 - 6653919 | 71397.8 |
| hypothetical protein | EXZ48_32190 | Not Available | + | 6653916 - 6655208 | 44720.8 |
| calcium-binding protein | EXZ48_32195 | Not Available | - | 6655198 - 6655974 | 27313.4 |
| hypothetical protein | EXZ48_32200 | Not Available | + | 6656102 - 6656436 | 11700.9 |
| l-threonine 3-dehydrogenase | EXZ48_32205 | Not Available | + | 6656554 - 6657591 | 37382.5 |
| gfa family protein | EXZ48_32210 | Not Available | + | 6657662 - 6658009 | 12741.3 |
| rna polymerase sigma factor rpod | EXZ48_32215 | Not Available | + | 6658431 - 6660485 | 77383.8 |
| calcium-binding protein | EXZ48_32220 | Not Available | - | 6660642 - 6661499 | 28578.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.