Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | EXZ48_31865 | Not Available | - | 6580417 - 6589065 | 314544.0 |
| duf1488 domain-containing protein | EXZ48_31870 | Not Available | - | 6589168 - 6589419 | 9304.0 |
| hypothetical protein | EXZ48_31875 | Not Available | + | 6590041 - 6590328 | 10577.7 |
| hypothetical protein | EXZ48_31880 | Not Available | + | 6590422 - 6590709 | 10484.5 |
| transglutaminase family protein | EXZ48_31885 | Not Available | + | 6590779 - 6591665 | 33436.0 |
| taxi family trap transporter solute-binding subunit | EXZ48_31900 | Not Available | + | 6592854 - 6593813 | 33648.5 |
| trap transporter permease | EXZ48_31905 | Not Available | + | 6593890 - 6595995 | 72793.7 |
| duf1850 domain-containing protein | EXZ48_31910 | Not Available | + | 6595992 - 6596387 | 13685.3 |
| sensor histidine kinase | EXZ48_31915 | Not Available | + | 6596445 - 6598295 | 66241.3 |
| sigma-54-dependent fis family transcriptional regulator | EXZ48_31920 | Not Available | + | 6598292 - 6599653 | 50101.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.