Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| manganese-binding transcriptional regulator mntr | EXZ48_31760 | Not Available | + | 6561086 - 6561556 | 17296.6 |
| disulfide bond formation protein b | EXZ48_31765 | Not Available | + | 6561783 - 6562223 | 16185.3 |
| disulfide bond formation protein dsba | EXZ48_31770 | Not Available | + | 6562220 - 6562867 | 23388.9 |
| sco family protein | EXZ48_31775 | Not Available | - | 6562999 - 6563607 | 22029.5 |
| copper chaperone pcu(a)c | EXZ48_31780 | Not Available | - | 6563604 - 6564107 | 17671.2 |
| hypothetical protein | EXZ48_31785 | Not Available | - | 6564245 - 6564529 | 10804.9 |
| is21 family transposase | EXZ48_31790 | Not Available | + | 6564737 - 6566266 | 58316.8 |
| atp-binding protein | EXZ48_31795 | Not Available | + | 6566279 - 6567016 | 27531.1 |
| lysr family transcriptional regulator | EXZ48_31805 | Not Available | - | 6567534 - 6568478 | 34561.1 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | EXZ48_31810 | Not Available | + | 6568603 - 6569649 | 39477.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.