Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase | EXZ48_31710 | Not Available | + | 6553275 - 6553964 | 25061.9 |
| signal peptidase ii | EXZ48_31715 | Not Available | + | 6553968 - 6554474 | 18230.5 |
| mfs transporter | EXZ48_31720 | Not Available | - | 6554508 - 6555827 | 46245.1 |
| metal-sensing transcriptional repressor | EXZ48_31725 | Not Available | - | 6555843 - 6556118 | 10257.4 |
| hypothetical protein | EXZ48_31730 | Not Available | - | 6556189 - 6556464 | 10087.6 |
| hypothetical protein | EXZ48_31735 | Not Available | - | 6556471 - 6556782 | 11050.9 |
| sco family protein | EXZ48_31740 | Not Available | - | 6556791 - 6557399 | 22504.0 |
| copper chaperone pcu(a)c | EXZ48_31745 | Not Available | - | 6557383 - 6558468 | 38036.3 |
| metal transporter | EXZ48_31750 | Not Available | - | 6558559 - 6559752 | 41362.1 |
| copper oxidase | EXZ48_31755 | Not Available | - | 6559749 - 6560768 | 38320.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.