Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase | EXZ48_31660 | Not Available | - | 6545323 - 6545952 | 22966.6 |
| hypothetical protein | EXZ48_31665 | Not Available | + | 6546327 - 6546650 | 12063.4 |
| pseudoazurin | EXZ48_31670 | Not Available | + | 6546907 - 6547362 | 16158.0 |
| copper resistance protein copc | EXZ48_31675 | Not Available | + | 6547567 - 6547965 | 14199.9 |
| copper resistance protein copd | EXZ48_31680 | Not Available | + | 6547976 - 6548818 | 31036.8 |
| transglutaminase | EXZ48_31685 | Not Available | + | 6548917 - 6549519 | 22073.1 |
| mapeg family protein | EXZ48_31690 | Not Available | + | 6549722 - 6550291 | 20003.1 |
| dsba family protein | EXZ48_31695 | Not Available | + | 6550461 - 6551102 | 23417.2 |
| ppic-type peptidyl-prolyl cis-trans isomerase | EXZ48_31700 | Not Available | + | 6551102 - 6551971 | 31125.3 |
| murein l,d-transpeptidase | EXZ48_31705 | Not Available | + | 6552041 - 6553081 | 37498.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.