Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l22 | EXZ48_31610 | Not Available | - | 6538897 - 6539286 | 14236.3 |
| 30s ribosomal protein s19 | EXZ48_31615 | Not Available | - | 6539289 - 6539567 | 10383.6 |
| 50s ribosomal protein l2 | EXZ48_31620 | Not Available | - | 6539584 - 6540420 | 30340.6 |
| 50s ribosomal protein l23 | EXZ48_31625 | Not Available | - | 6540452 - 6540745 | 10500.8 |
| 50s ribosomal protein l4 | EXZ48_31630 | Not Available | - | 6540742 - 6541362 | 22227.0 |
| 50s ribosomal protein l3 | EXZ48_31635 | Not Available | - | 6541375 - 6542058 | 23871.6 |
| 30s ribosomal protein s10 | EXZ48_31640 | Not Available | - | 6542218 - 6542526 | 11557.1 |
| hypothetical protein | EXZ48_31645 | Not Available | - | 6542716 - 6542791 | 2529.1 |
| duf882 domain-containing protein | EXZ48_31650 | Not Available | - | 6542854 - 6544170 | 47458.8 |
| fad-binding protein | EXZ48_31655 | Not Available | - | 6544256 - 6545326 | 38644.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.