Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | EXZ48_31460 | Not Available | + | 6516001 - 6517008 | 37816.2 |
| hypothetical protein | EXZ48_31465 | Not Available | + | 6517408 - 6518766 | 49385.5 |
| alpha/beta hydrolase | EXZ48_31470 | Not Available | + | 6519050 - 6519688 | 22499.1 |
| alpha/beta fold hydrolase | EXZ48_31475 | Not Available | - | 6520076 - 6521020 | 33607.9 |
| duf1883 domain-containing protein | EXZ48_31480 | Not Available | + | 6521286 - 6521603 | 11576.9 |
| replication-associated recombination protein a | EXZ48_31485 | Not Available | - | 6521619 - 6522926 | 48417.7 |
| degq family serine endoprotease | EXZ48_31490 | Not Available | - | 6522923 - 6524326 | 49411.9 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | EXZ48_31495 | Not Available | + | 6524532 - 6525470 | 34441.1 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | EXZ48_31500 | Not Available | + | 6525470 - 6526126 | 24678.2 |
| ggdef domain-containing protein | EXZ48_31505 | Not Available | - | 6526148 - 6527350 | 42846.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.