Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| capsular biosynthesis protein | EXZ48_02160 | Not Available | + | 470918 - 472330 | 52684.0 |
| abc transporter atp-binding protein | EXZ48_02165 | Not Available | - | 472416 - 473099 | 24906.1 |
| hypothetical protein | EXZ48_02170 | Not Available | - | 473099 - 473890 | 29558.0 |
| hypothetical protein | EXZ48_02175 | Not Available | - | 473915 - 475324 | 52026.9 |
| 3'(2'),5'-bisphosphate nucleotidase | EXZ48_02180 | Not Available | - | 475517 - 476329 | 28359.4 |
| sarcosine oxidase subunit beta family protein | EXZ48_02185 | Not Available | + | 476527 - 477777 | 45713.0 |
| sarcosine oxidase subunit delta | EXZ48_02190 | Not Available | + | 477785 - 478060 | 10266.0 |
| sarcosine oxidase subunit alpha family protein | EXZ48_02195 | Not Available | + | 478057 - 481014 | 105930.0 |
| sarcosine oxidase subunit gamma | EXZ48_02200 | Not Available | + | 481024 - 481578 | 19257.1 |
| fad-dependent oxidoreductase | EXZ48_02205 | Not Available | + | 481699 - 484125 | 89036.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.