Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein | EXZ48_31410 | Not Available | + | 6505410 - 6506429 | 36643.3 |
| hypothetical protein | EXZ48_31415 | Not Available | + | 6506485 - 6506718 | 8617.39 |
| hypothetical protein | EXZ48_31420 | Not Available | + | 6506735 - 6507106 | 13065.6 |
| type vi secretion protein | EXZ48_31425 | Not Available | + | 6507261 - 6507995 | 27476.4 |
| conjugal transfer protein | EXZ48_31430 | Not Available | + | 6507992 - 6508777 | 29002.7 |
| trbi/virb10 family protein | EXZ48_31435 | Not Available | + | 6508774 - 6510192 | 51702.0 |
| p-type dna transfer atpase virb11 | EXZ48_31440 | Not Available | + | 6510189 - 6511187 | 36403.9 |
| hypothetical protein | EXZ48_31445 | Not Available | + | 6511184 - 6513310 | 77626.6 |
| sdr family oxidoreductase | EXZ48_31450 | Not Available | - | 6513386 - 6514156 | 27028.0 |
| hypothetical protein | EXZ48_31455 | Not Available | + | 6514398 - 6516011 | 58471.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.