Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative addiction module antidote protein | EXZ48_31360 | Not Available | - | 6496626 - 6496922 | 10480.3 |
| hypothetical protein | EXZ48_31365 | Not Available | - | 6497068 - 6497847 | 28714.0 |
| thermonuclease family protein | EXZ48_31370 | Not Available | - | 6498505 - 6499014 | 17728.9 |
| hypothetical protein | EXZ48_31375 | Not Available | - | 6499004 - 6499477 | 16969.3 |
| lytic transglycosylase domain-containing protein | EXZ48_31380 | Not Available | + | 6499711 - 6500268 | 20315.1 |
| type vi secretion protein | EXZ48_31385 | Not Available | + | 6500270 - 6500641 | 13134.6 |
| hypothetical protein | EXZ48_31390 | Not Available | + | 6500643 - 6500933 | 11008.8 |
| virb4 family type iv secretion/conjugal transfer atpase | EXZ48_31395 | Not Available | + | 6500930 - 6503341 | 89721.2 |
| hypothetical protein | EXZ48_31400 | Not Available | + | 6503271 - 6504497 | 43934.1 |
| conjugal transfer protein | EXZ48_31405 | Not Available | + | 6504509 - 6505225 | 24574.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.