Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_31310 | Not Available | + | 6491324 - 6491620 | 11103.0 |
| fis family transcriptional regulator | EXZ48_31315 | Not Available | - | 6491738 - 6492031 | 10994.1 |
| type ii toxin-antitoxin system rele/pare family toxin | EXZ48_31320 | Not Available | - | 6492028 - 6492381 | 13469.6 |
| hypothetical protein | EXZ48_31325 | Not Available | - | 6492451 - 6493464 | 37892.6 |
| single-stranded dna-binding protein | EXZ48_31330 | Not Available | - | 6494137 - 6494466 | 12249.4 |
| hypothetical protein | EXZ48_31335 | Not Available | - | 6494499 - 6495008 | 18645.1 |
| helix-turn-helix domain-containing protein | EXZ48_31340 | Not Available | + | 6495061 - 6495375 | 11923.7 |
| hypothetical protein | EXZ48_31345 | Not Available | + | 6495437 - 6495868 | 15726.8 |
| type ii toxin-antitoxin system vapc family toxin | EXZ48_31350 | Not Available | - | 6495888 - 6496331 | 16208.3 |
| protein transcription factor | EXZ48_31355 | Not Available | - | 6496331 - 6496570 | 8856.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.