Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plasmid mobilization relaxosome protein mobc | EXZ48_31240 | Not Available | + | 6475974 - 6476444 | 17206.0 |
| hypothetical protein | EXZ48_31245 | Not Available | + | 6476434 - 6479010 | 92100.3 |
| hypothetical protein | EXZ48_31250 | Not Available | - | 6479019 - 6479237 | 7671.93 |
| xre family transcriptional regulator | EXZ48_31255 | Not Available | + | 6479761 - 6480174 | 14528.4 |
| response regulator | EXZ48_31260 | Not Available | - | 6480357 - 6481793 | 52611.8 |
| hamp domain-containing histidine kinase | EXZ48_31265 | Not Available | - | 6481793 - 6482680 | 31993.2 |
| hypothetical protein | EXZ48_31270 | Not Available | - | 6482670 - 6484538 | 68018.5 |
| smc-scp complex subunit scpb | EXZ48_31285 | Not Available | + | 6487301 - 6487975 | 24814.3 |
| pin domain-containing protein | EXZ48_31290 | Not Available | - | 6488017 - 6488595 | 21229.6 |
| dna-binding protein | EXZ48_31295 | Not Available | - | 6488585 - 6489031 | 16199.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.