Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| calcium-binding protein | EXZ48_31140 | Not Available | + | 6453182 - 6454123 | 30842.3 |
| type i secretion system permease/atpase | EXZ48_31145 | Not Available | + | 6454215 - 6455906 | 60249.4 |
| hlyd family type i secretion periplasmic adaptor subunit | EXZ48_31150 | Not Available | + | 6455921 - 6457303 | 51189.3 |
| glycosyltransferase | EXZ48_31155 | Not Available | + | 6457533 - 6458759 | 46447.9 |
| hypothetical protein | EXZ48_31160 | Not Available | + | 6458805 - 6460664 | 70910.8 |
| sulfotransferase | EXZ48_31165 | Not Available | + | 6460579 - 6461319 | 27999.4 |
| hypothetical protein | EXZ48_31170 | Not Available | - | 6461358 - 6462122 | 29628.8 |
| hypothetical protein | EXZ48_31175 | Not Available | + | 6462846 - 6463286 | 15373.0 |
| hypothetical protein | EXZ48_31180 | Not Available | + | 6463395 - 6463718 | 12030.0 |
| hypothetical protein | EXZ48_31185 | Not Available | + | 6463737 - 6463940 | 7657.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.