Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | EXZ48_31065 | Not Available | + | 6444027 - 6444257 | 8336.29 |
| hypothetical protein | EXZ48_31075 | Not Available | - | 6444757 - 6445275 | 18947.4 |
| duf2384 domain-containing protein | EXZ48_31080 | Not Available | - | 6445268 - 6445639 | 13001.7 |
| type ii toxin-antitoxin system vapc family toxin | EXZ48_31085 | Not Available | - | 6446089 - 6446475 | 14007.5 |
| psk operon transcription factor | EXZ48_31090 | Not Available | - | 6446475 - 6446729 | 9314.28 |
| hypothetical protein | EXZ48_31105 | Not Available | + | 6448560 - 6449654 | 40413.1 |
| type ii toxin-antitoxin system vapc family toxin | EXZ48_31120 | Not Available | - | 6450051 - 6450437 | 13950.8 |
| transcription factor | EXZ48_31125 | Not Available | - | 6450437 - 6450694 | 9402.22 |
| antibiotic acetyltransferase | EXZ48_31130 | Not Available | + | 6451025 - 6451819 | 29537.6 |
| sulfotransferase | EXZ48_31135 | Not Available | - | 6451835 - 6452767 | 36207.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.