Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_31010 | Not Available | - | 6430563 - 6431423 | 30523.6 |
| abc transporter permease | EXZ48_31015 | Not Available | - | 6431420 - 6432361 | 33247.0 |
| abc transporter substrate-binding protein | EXZ48_31020 | Not Available | - | 6432381 - 6433898 | 55580.6 |
| calcium-binding protein | EXZ48_31025 | Not Available | - | 6434065 - 6434703 | 22849.4 |
| hypothetical protein | EXZ48_31030 | Not Available | - | 6434932 - 6435240 | 11412.6 |
| atpase | EXZ48_31035 | Not Available | - | 6435240 - 6435923 | 24471.3 |
| hepn domain-containing protein | EXZ48_31040 | Not Available | - | 6436351 - 6437271 | 35438.5 |
| mobilization protein | EXZ48_31050 | Not Available | - | 6438923 - 6439225 | 11227.3 |
| ti-type conjugative transfer relaxase traa | EXZ48_31055 | Not Available | + | 6439496 - 6443233 | 138265.0 |
| hypothetical protein | EXZ48_31060 | Not Available | - | 6443260 - 6443889 | 23403.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.