Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inositol 2-dehydrogenase | EXZ48_30960 | Not Available | - | 6420791 - 6421792 | 35650.7 |
| gfo/idh/moca family oxidoreductase | EXZ48_30965 | Not Available | + | 6421920 - 6423095 | 41853.0 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | EXZ48_30970 | Not Available | + | 6423186 - 6425027 | 65844.7 |
| dna-binding protein | EXZ48_30975 | Not Available | - | 6425116 - 6425535 | 14945.2 |
| hypothetical protein | EXZ48_30980 | Not Available | + | 6425607 - 6425996 | 14154.8 |
| gaf domain-containing protein | EXZ48_30985 | Not Available | + | 6426101 - 6426592 | 17349.8 |
| cell division topological specificity factor mine | EXZ48_30990 | Not Available | - | 6426652 - 6426915 | 9678.72 |
| septum site-determining protein mind | EXZ48_30995 | Not Available | - | 6426912 - 6427727 | 29108.4 |
| septum formation inhibitor minc | EXZ48_31000 | Not Available | - | 6427759 - 6428529 | 27410.2 |
| abc transporter atp-binding protein | EXZ48_31005 | Not Available | - | 6428755 - 6430560 | 65041.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.