Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | EXZ48_30910 | Not Available | + | 6409707 - 6410483 | 27594.5 |
| gfo/idh/moca family oxidoreductase | EXZ48_30915 | Not Available | + | 6410622 - 6411743 | 39962.7 |
| gfo/idh/moca family oxidoreductase | EXZ48_30920 | Not Available | + | 6411763 - 6412752 | 34656.4 |
| nad-dependent succinate-semialdehyde dehydrogenase | EXZ48_30925 | Not Available | + | 6412892 - 6414328 | 50543.4 |
| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | EXZ48_30930 | Not Available | + | 6414340 - 6415155 | 28879.6 |
| hydroxyacid dehydrogenase | EXZ48_30935 | Not Available | + | 6415156 - 6416145 | 34645.3 |
| sugar abc transporter atp-binding protein | EXZ48_30940 | Not Available | + | 6416148 - 6417656 | 53518.4 |
| abc transporter permease | EXZ48_30945 | Not Available | + | 6417761 - 6418669 | 31454.4 |
| abc transporter substrate-binding protein | EXZ48_30950 | Not Available | + | 6418703 - 6419650 | 34120.9 |
| murr/rpir family transcriptional regulator | EXZ48_30955 | Not Available | + | 6419819 - 6420730 | 33228.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.