Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_02110 | Not Available | + | 454873 - 455091 | 7860.38 |
| ring-cleaving dioxygenase | EXZ48_02115 | Not Available | + | 455247 - 456803 | 55524.2 |
| nad(p)h-dependent oxidoreductase | EXZ48_02120 | Not Available | - | 456872 - 457429 | 19547.6 |
| ring-cleaving dioxygenase | EXZ48_02125 | Not Available | - | 457504 - 458457 | 34902.3 |
| hamp domain-containing protein | EXZ48_02130 | Not Available | + | 458822 - 461143 | 81288.1 |
| efflux rnd transporter periplasmic adaptor subunit | EXZ48_02135 | Not Available | + | 461682 - 462767 | 38328.2 |
| efflux rnd transporter periplasmic adaptor subunit | EXZ48_02140 | Not Available | + | 462764 - 463837 | 37246.8 |
| efflux rnd transporter permease subunit | EXZ48_02145 | Not Available | + | 463834 - 466917 | 112290.0 |
| polysaccharide export protein | EXZ48_02150 | Not Available | + | 467380 - 468600 | 42926.3 |
| capsular polysaccharide biosynthesis protein | EXZ48_02155 | Not Available | + | 468696 - 470741 | 73380.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.