Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_30850 | Not Available | - | 6394363 - 6397947 | 124501.0 |
| glycosyltransferase | EXZ48_30855 | Not Available | - | 6398331 - 6400649 | 86683.5 |
| class i sam-dependent methyltransferase | EXZ48_30860 | Not Available | - | 6400875 - 6402464 | 59507.2 |
| class i sam-dependent methyltransferase | EXZ48_30865 | Not Available | - | 6402570 - 6403202 | 23213.3 |
| hypothetical protein | EXZ48_30870 | Not Available | + | 6403388 - 6404569 | 43124.6 |
| calcium-binding protein | EXZ48_30875 | Not Available | - | 6404646 - 6405221 | 19523.2 |
| Trna-met | Not Available | Not Available | + | 6405927 - 6406003 | Not Available |
| phytanoyl-coa dioxygenase | EXZ48_30895 | Not Available | + | 6406301 - 6407485 | 42570.5 |
| sugar abc transporter substrate-binding protein | EXZ48_30900 | Not Available | + | 6407556 - 6408500 | 33057.4 |
| abc transporter permease | EXZ48_30905 | Not Available | + | 6408610 - 6409707 | 39091.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.