Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | EXZ48_30800 | Not Available | - | 6379956 - 6381023 | 40037.3 |
| glucose-1-phosphate thymidylyltransferase | EXZ48_30805 | Not Available | + | 6381194 - 6382078 | 32228.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | EXZ48_30810 | Not Available | + | 6382075 - 6382635 | 20834.6 |
| glycosyltransferase | EXZ48_30815 | Not Available | - | 6382642 - 6385038 | 89670.5 |
| tetratricopeptide repeat protein | EXZ48_30820 | Not Available | - | 6385085 - 6387781 | 99884.8 |
| capsular polysaccharide biosynthesis protein | EXZ48_30825 | Not Available | - | 6387795 - 6389072 | 48632.5 |
| sulfate adenylyltransferase subunit cysn | EXZ48_30830 | Not Available | - | 6389119 - 6391020 | 69963.2 |
| sulfate adenylyltransferase subunit cysd | EXZ48_30835 | Not Available | - | 6391020 - 6391949 | 35459.6 |
| replication protein | EXZ48_30840 | Not Available | + | 6392149 - 6393345 | 45428.5 |
| hypothetical protein | EXZ48_30845 | Not Available | + | 6393965 - 6394285 | 12124.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.