Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase | EXZ48_30750 | Not Available | - | 6367078 - 6367605 | 19488.3 |
| is110 family transposase | EXZ48_30755 | Not Available | + | 6368043 - 6369074 | 38579.3 |
| hypothetical protein | EXZ48_30760 | Not Available | + | 6369542 - 6370708 | 42260.0 |
| taxi family trap transporter solute-binding subunit | EXZ48_30765 | Not Available | - | 6370713 - 6371687 | 33033.5 |
| trap transporter fused permease subunit | EXZ48_30770 | Not Available | - | 6371699 - 6373645 | 67403.9 |
| glycosyltransferase family 2 protein | EXZ48_30775 | Not Available | - | 6373783 - 6374790 | 39145.0 |
| hypothetical protein | EXZ48_30780 | Not Available | - | 6374783 - 6376504 | 64913.0 |
| m23 family metallopeptidase | EXZ48_30785 | Not Available | + | 6376617 - 6377606 | 35508.6 |
| hypothetical protein | EXZ48_30790 | Not Available | + | 6377721 - 6379034 | 49825.7 |
| dtdp-4-dehydrorhamnose reductase | EXZ48_30795 | Not Available | - | 6379050 - 6379949 | 31763.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.