Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | EXZ48_30675 | Not Available | + | 6350151 - 6350981 | 29860.8 |
| copper resistance protein | EXZ48_30680 | Not Available | + | 6351116 - 6351541 | 15177.5 |
| cytochrome b | EXZ48_30685 | Not Available | + | 6351589 - 6352089 | 18054.2 |
| duf4010 domain-containing protein | EXZ48_30690 | Not Available | - | 6352134 - 6353387 | 42299.4 |
| cadmium-translocating p-type atpase | EXZ48_30695 | Not Available | + | 6353600 - 6355384 | 60810.6 |
| hypothetical protein | EXZ48_30715 | Not Available | + | 6357351 - 6357677 | 11707.2 |
| phosphoketolase family protein | EXZ48_30720 | Not Available | + | 6357750 - 6360116 | 87928.7 |
| mbl fold metallo-hydrolase | EXZ48_30725 | Not Available | + | 6360157 - 6361515 | 49938.0 |
| efflux rnd transporter permease subunit | EXZ48_30740 | Not Available | - | 6362638 - 6365784 | 110543.0 |
| efflux rnd transporter periplasmic adaptor subunit | EXZ48_30745 | Not Available | - | 6365788 - 6366906 | 40290.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.