Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | EXZ48_30570 | Not Available | - | 6331530 - 6332405 | 32262.1 |
| abc transporter substrate-binding protein | EXZ48_30575 | Not Available | - | 6332480 - 6333778 | 46420.9 |
| abc transporter atp-binding protein | EXZ48_30580 | Not Available | - | 6333793 - 6334857 | 37845.7 |
| deor/glpr transcriptional regulator | EXZ48_30585 | Not Available | - | 6334893 - 6335687 | 28659.6 |
| penicillin-binding protein 2 | EXZ48_30590 | Not Available | + | 6336737 - 6338497 | 63995.0 |
| glycosyltransferase | EXZ48_30595 | Not Available | - | 6338626 - 6339888 | 44977.4 |
| hypothetical protein | EXZ48_30600 | Not Available | - | 6339892 - 6340023 | 5114.25 |
| hamp domain-containing histidine kinase | EXZ48_30605 | Not Available | - | 6340449 - 6341813 | 49621.1 |
| response regulator transcription factor | EXZ48_30610 | Not Available | - | 6341810 - 6342469 | 25047.0 |
| peptidase | EXZ48_30615 | Not Available | - | 6342469 - 6342801 | 12036.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.