Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase family protein | EXZ48_30470 | Not Available | + | 6310300 - 6310938 | 23650.3 |
| lrp/asnc family transcriptional regulator | EXZ48_30475 | Not Available | + | 6311005 - 6311493 | 18855.0 |
| hypothetical protein | EXZ48_30480 | Not Available | - | 6311522 - 6311896 | 12728.4 |
| nad(p)-dependent oxidoreductase | EXZ48_30485 | Not Available | - | 6311898 - 6312770 | 30566.8 |
| class i sam-dependent methyltransferase | EXZ48_30490 | Not Available | - | 6312839 - 6313654 | 29588.8 |
| duf2270 domain-containing protein | EXZ48_30495 | Not Available | + | 6313786 - 6314514 | 27246.5 |
| aspartate-semialdehyde dehydrogenase | EXZ48_30500 | Not Available | - | 6314528 - 6314794 | 10515.8 |
| abc transporter permease | EXZ48_30505 | Not Available | - | 6314939 - 6315769 | 30957.5 |
| abc transporter permease | EXZ48_30510 | Not Available | - | 6315766 - 6316569 | 28623.7 |
| transporter substrate-binding domain-containing protein | EXZ48_30515 | Not Available | - | 6316739 - 6317521 | 27930.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.