Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_30420 | Not Available | + | 6302284 - 6303045 | 27962.1 |
| atpase | EXZ48_30425 | Not Available | - | 6303067 - 6303546 | 17920.1 |
| tigr02281 family clan aa aspartic protease | EXZ48_30430 | Not Available | - | 6303646 - 6304344 | 24904.6 |
| duf1289 domain-containing protein | EXZ48_30435 | Not Available | - | 6304341 - 6304562 | 8383.17 |
| adenosylcobinamide-gdp ribazoletransferase | EXZ48_30440 | Not Available | - | 6304600 - 6305382 | 26329.5 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | EXZ48_30445 | Not Available | + | 6305687 - 6306703 | 34826.3 |
| diacylglycerol kinase | EXZ48_30450 | Not Available | + | 6306727 - 6307182 | 16187.8 |
| hamp domain-containing histidine kinase | EXZ48_30455 | Not Available | - | 6307224 - 6308759 | 55228.3 |
| thermonuclease family protein | EXZ48_30460 | Not Available | + | 6309029 - 6309592 | 20123.0 |
| ethd family reductase | EXZ48_30465 | Not Available | + | 6309891 - 6310205 | 11488.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.