Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EXZ48_30370 | Not Available | - | 6291215 - 6292141 | 32978.1 |
| flavodoxin family protein | EXZ48_30375 | Not Available | + | 6292230 - 6292817 | 21459.7 |
| hypothetical protein | EXZ48_30380 | Not Available | + | 6292946 - 6293299 | 12965.1 |
| duf1800 domain-containing protein | EXZ48_30385 | Not Available | + | 6293361 - 6294833 | 53328.2 |
| duf1501 domain-containing protein | EXZ48_30390 | Not Available | + | 6294842 - 6296014 | 41463.5 |
| acyl-coa thioesterase | EXZ48_30395 | Not Available | - | 6296076 - 6296462 | 13624.5 |
| hamp domain-containing protein | EXZ48_30400 | Not Available | + | 6296672 - 6298492 | 65017.0 |
| extensin family protein | EXZ48_30405 | Not Available | + | 6298949 - 6300079 | 40312.0 |
| sulfite exporter taue/safe family protein | EXZ48_30410 | Not Available | + | 6300447 - 6301268 | 28514.9 |
| abc transporter atp-binding protein | EXZ48_30415 | Not Available | + | 6301361 - 6302287 | 33395.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.