Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| paraquat-inducible protein a | EXZ48_02060 | Not Available | + | 444796 - 445257 | 16457.0 |
| duf1153 domain-containing protein | EXZ48_02065 | Not Available | - | 445323 - 445598 | 10331.5 |
| luxr family transcriptional regulator | EXZ48_02070 | Not Available | + | 446033 - 446782 | 27683.3 |
| trna 2-thiouridine(34) synthase mnma | EXZ48_02075 | Not Available | + | 447008 - 448204 | 43334.6 |
| Trna-met | Not Available | Not Available | + | 448337 - 448413 | Not Available |
| adenylate/guanylate cyclase domain-containing protein | EXZ48_02085 | Not Available | + | 448518 - 449927 | 51747.1 |
| hypothetical protein | EXZ48_02090 | Not Available | + | 450076 - 450720 | 22933.0 |
| faa hydrolase family protein | EXZ48_02095 | Not Available | - | 451055 - 451894 | 29338.3 |
| fcd domain-containing protein | EXZ48_02100 | Not Available | + | 452008 - 452682 | 24487.2 |
| efflux transporter outer membrane subunit | EXZ48_02105 | Not Available | - | 452789 - 454213 | 50413.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.