Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_30320 | Not Available | + | 6280303 - 6280743 | 16435.8 |
| duf4325 domain-containing protein | EXZ48_30325 | Not Available | + | 6281291 - 6281659 | 13821.6 |
| hypothetical protein | EXZ48_30330 | Not Available | + | 6281622 - 6282212 | 22713.1 |
| excinuclease abc subunit uvrb | EXZ48_30335 | Not Available | - | 6282223 - 6285294 | 112349.0 |
| duf3137 domain-containing protein | EXZ48_30340 | Not Available | + | 6285407 - 6286351 | 34831.2 |
| lysr family transcriptional regulator | EXZ48_30345 | Not Available | - | 6286382 - 6287317 | 34522.9 |
| alpha/beta hydrolase | EXZ48_30350 | Not Available | + | 6287477 - 6288451 | 36261.4 |
| hypothetical protein | EXZ48_30355 | Not Available | - | 6288519 - 6289151 | 22696.3 |
| sensor histidine kinase | EXZ48_30360 | Not Available | + | 6289356 - 6290447 | 40325.2 |
| response regulator transcription factor | EXZ48_30365 | Not Available | + | 6290452 - 6291228 | 29101.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.