Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | EXZ48_30155 | Not Available | - | 6244449 - 6245180 | 27565.2 |
| dmt family transporter | EXZ48_30160 | Not Available | - | 6245347 - 6246258 | 31607.9 |
| amino acid abc transporter permease | EXZ48_30165 | Not Available | - | 6246248 - 6247219 | 35599.7 |
| fad-binding oxidoreductase | EXZ48_30170 | Not Available | - | 6247249 - 6248529 | 46545.6 |
| transporter substrate-binding domain-containing protein | EXZ48_30175 | Not Available | - | 6248587 - 6249414 | 30221.0 |
| fad-binding oxidoreductase | EXZ48_30180 | Not Available | - | 6249913 - 6251043 | 39061.6 |
| gfo/idh/moca family oxidoreductase | EXZ48_30185 | Not Available | - | 6251088 - 6252095 | 36067.4 |
| amino acid abc transporter permease/atp-binding protein | EXZ48_30190 | Not Available | - | 6252114 - 6253622 | 54224.0 |
| copper chaperone | EXZ48_30205 | Not Available | + | 6254886 - 6255107 | 7783.29 |
| cadmium-translocating p-type atpase | EXZ48_30210 | Not Available | + | 6255104 - 6257143 | 70595.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.