Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_30055 | Not Available | + | 6221823 - 6222656 | 29665.5 |
| abc transporter atp-binding protein | EXZ48_30060 | Not Available | + | 6222661 - 6224331 | 59929.1 |
| alpha/beta hydrolase | EXZ48_30065 | Not Available | + | 6224359 - 6225210 | 31970.9 |
| abc transporter substrate-binding protein | EXZ48_30070 | Not Available | + | 6225244 - 6226788 | 56353.7 |
| peptidase c45 | EXZ48_30075 | Not Available | + | 6226938 - 6228029 | 38253.6 |
| hypothetical protein | EXZ48_30080 | Not Available | + | 6228120 - 6228524 | 14987.9 |
| hypothetical protein | EXZ48_30085 | Not Available | - | 6228960 - 6229883 | 33050.6 |
| voc family protein | EXZ48_30090 | Not Available | + | 6230038 - 6230415 | 14233.9 |
| methyl-accepting chemotaxis protein | EXZ48_30095 | Not Available | - | 6230484 - 6232142 | 58789.2 |
| homocysteine s-methyltransferase | EXZ48_30100 | Not Available | - | 6233132 - 6234037 | 32020.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.