Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | EXZ48_30005 | Not Available | + | 6211677 - 6212168 | 17849.7 |
| tripartite tricarboxylate transporter permease | EXZ48_30010 | Not Available | - | 6212215 - 6213729 | 52316.5 |
| tripartite tricarboxylate transporter tctb family protein | EXZ48_30015 | Not Available | - | 6213761 - 6214216 | 15683.7 |
| tripartite tricarboxylate transporter substrate binding protein | EXZ48_30020 | Not Available | - | 6214306 - 6215280 | 33865.8 |
| response regulator transcription factor | EXZ48_30025 | Not Available | + | 6215508 - 6216179 | 25210.6 |
| sensor histidine kinase | EXZ48_30030 | Not Available | + | 6216176 - 6217564 | 50496.2 |
| abc transporter substrate-binding protein | EXZ48_30035 | Not Available | + | 6217561 - 6218640 | 39934.8 |
| fcd domain-containing protein | EXZ48_30040 | Not Available | - | 6218665 - 6219783 | 42070.4 |
| acyl-coa--6-aminopenicillanic acid acyltransferase | EXZ48_30045 | Not Available | + | 6219719 - 6220903 | 42984.3 |
| abc transporter permease | EXZ48_30050 | Not Available | + | 6220885 - 6221826 | 34040.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.